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Burrows-Wheeler Aligner

Preliminaries

We assume you are familiar with the following material:

TODO:


  1. Li, H., & Durbin, R. (2010). Fast and accurate long-read alignment with Burrows–Wheeler transform. Bioinformatics, 26(5), 589-595. doi: 10.1093/bioinformatics/btp698 

  2. Li, H., & Durbin, R. (2009). Fast and accurate short read alignment with Burrows–Wheeler transform. Bioinformatics, 25(14), 1754-1760. doi: 10.1093/bioinformatics/btp324