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Bowtie

TODO:

  1. github.com/BenLangmead/bowtie ↩

  2. Langmead, B., & Salzberg, S. L. (2012). Fast gapped-read alignment with Bowtie 2. Nature methods, 9(4), 357-359. doi: 10.1038/nmeth.1923 ↩

  3. Langmead, B., Trapnell, C., Pop, M., & Salzberg, S. L. (2009). Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome biology, 10(3), 1-10. doi: 10.1186/gb-2009-10-3-r25 ↩