Omics Sequencing Genomics Alignment Transcriptomics Appendices

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Appendices
- Algorithms
  - Compression
    Burrows–Wheeler transform
  - Search
    FM-index
- File types
Genomics
Sequence alignment
Sequencing
- DNA sequencing
- RNA sequencing
  - RNA-seq library
Transcriptomics

Genome assembly
Gene prediction
- Eukaryotic
- Tools
Genome annotation
- Evaluation
- Tools

Genome assembly

Contig generation

Contig generation

TODO:

Path traversal in the assembly graph Criteria for selecting high-quality contigs

Last updated on January 19, 2025